Systematics Collections Data

ICMP 6873 – Epicoccum plurivorum (P.R. Johnst.) Q. Chen & L. Cai

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 6873
Type status:
ex Type
Culture type:
Fungal Culture
Database record added:
25 January 2002
Database record updated:
24 February 2023
Components
Primary component
Active identification
Determined name:
Epicoccum plurivorum (P.R. Johnst.) Q. Chen & L. Cai
Determiner:
P.R. Johnston
Identification date:
2017 (Verbatim: 2017)
Preferred name:
Epicoccum plurivorum (P.R. Johnst.) Q. Chen & L. Cai
Division:
Ascomycota
Class:
Dothideomycetes
Order:
Pleosporales
Family:
Didymellaceae
Identification type:
Determination
Associations:
isolated from Setaria sp.
Other identifications
Identification
Determined name:
Phoma plurivora P.R. Johnst.
Determiner:
Identification date:
Preferred name:
Epicoccum plurivorum (P.R. Johnst.) Q. Chen & L. Cai
Active:
no
Identification type:
Determination
Note:
identification confirmed based on DNA sequences [PRJ, Jan 2016]
Identification
Determined name:
Phoma plurivora
Determiner:
Identification date:
Preferred name:
Epicoccum plurivorum (P.R. Johnst.) Q. Chen & L. Cai
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Setaria sp.
Determiner:
Identification date:
Preferred name:
Setaria
Division:
Tracheophyta
Class:
Liliopsida
Order:
Poales
Family:
Gramineae
Identification type:
Determination
Part affected:
leaf and seedhead
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Mount Albert
Georeferences:
Latitude and Longitude (WGS84):  -36.884  174.716 
Verbatim locality:
Mt Albert
Verbatim collector:
P.R. Johnston
Standardised collector:
Peter R. Johnston
Verbatim date:
1979/02/15
Start date:
1979-02-15
Country:
New Zealand
New Zealand Area Codes:
Auckland
Native lands:
Ngāi Tai ki Tāmaki
Ngāti Maru (Hauraki)
Ngāti Paoa
Ngāti Tamaoho
Ngāti Tamaterā
Ngāti Whātua
Ngāti Whātua o Ōrākei
Te Ākitai Waiohua
Te Kawerau a Maki
Georeferences:
New Zealand Map Grid:  2663970E 6477870N  (WGS84 -36.887998 174.723076)
Culture flags
Price Category:
Category 1
External links
CIS - PDD:

PDD 40397

GenBank:

KT309342 - act

KT310008 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

GU237647 - tub2

KT309586 - tub2

GU237888 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

GU238132 - 28S ribosomal RNA

KT389634 - RPB2

MH861377 - genomic DNA

MH873128 - large subunit ribosomal RNA

Literature:

Chen, Q.; Jiang, J.R.; Zhang, G.Z.; Cai, L.; Crous, P.W. (2015)Resolving the Phoma enigma.Studies in Mycology82(1)137-217. DOI: 10.1016/j.simyco.2015.10.003

Johnston, P. R.; Park, D.; Ho, W. W. H.; Alexander, B. J. R. (2017)Genetic validation of historical plant pathology records - a case study based on the fungal genus Phoma from the ICMP culture collection.Plant Pathology66(9)1424-1431. DOI: 10.1111/ppa.12728

Hou, L.W.; Groenewald, J.Z.; Pfenning, L.H.; Yarden, O.; Crous, P.W.; Cai, L. (2020)The phoma-like dilemma.Studies in Mycology96309-396. DOI: 10.1016/j.simyco.2020.05.001

Culture events
Isolated:
Date:
01 February 1979 (Verbatim: 01 Feb 1979)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Peter R. Johnston (Reference number 79-23)
Date:
01 January 1986 (Verbatim: 01 Jan 1986)
Duplicates
American Type Culture Collection: ATCC 60463
Direction:
Duplicate
Westerdijk Fungal Biodiversity Institute: CBS 558.81
Assigned reference numbers
PDDCC:
PDDCC 6873
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice